Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube4bQ9ES00 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm22189-201ENSMUST00000103822 86 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm11524-201ENSMUST00000119349 807 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm20949-201ENSMUST00000206478 952 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ube4bQ9ES00 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm26464-201ENSMUST00000157094 305 ntBASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm5354-201ENSMUST00000182417 973 ntBASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ube4bQ9ES00 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms