Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tubb3Q9ERD7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm10434-201ENSMUST00000101158 471 ntBASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm8099-201ENSMUST00000200510 742 ntBASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Tubb3Q9ERD7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tubb3Q9ERD7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm14381-201ENSMUST00000122105 414 ntBASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm16296-201ENSMUST00000159905 325 ntBASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms