Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Gm42937-201ENSMUST00000197360 752 ntBASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Gm21769-201ENSMUST00000211922 111 ntBASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm24255-201ENSMUST00000104481 128 ntBASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm24845-201ENSMUST00000158034 109 ntBASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm28882-201ENSMUST00000185504 314 ntBASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.81□□□□□ -0.36
Chmp2aQ9DB34 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Gm14832-201ENSMUST00000121289 322 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Gm15547-201ENSMUST00000122152 333 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Gm17376-201ENSMUST00000166016 84 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms