Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chmp5Q9D7S9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm9083-201ENSMUST00000120423 819 ntBASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp5Q9D7S9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Gm8018-201ENSMUST00000173536 789 ntBASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp5Q9D7S9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm24644-201ENSMUST00000157114 139 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms