Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm25261-201ENSMUST00000157416 134 ntBASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm9630-201ENSMUST00000178304 885 ntBASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp4cQ9D7F7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm11425-201ENSMUST00000119608 498 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm25927-201ENSMUST00000175058 117 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm27731-201ENSMUST00000185192 107 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Gm9396-201ENSMUST00000076703 567 ntBASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp4cQ9D7F7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp4cQ9D7F7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms