Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssu72Q9CY97 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gm7488-201ENSMUST00000117148 684 ntBASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.17□□□□□ -0.46
Ssu72Q9CY97 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gm8420-201ENSMUST00000097103 598 ntBASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssu72Q9CY97 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.16□□□□□ -0.46
Ssu72Q9CY97 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Gm4271-201ENSMUST00000174444 973 ntBASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssu72Q9CY97 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Gm23912-201ENSMUST00000104687 87 ntBASIC12.15□□□□□ -0.46
Ssu72Q9CY97 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms