Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc3Q9CW03 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm12314-201ENSMUST00000118104 538 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Gm40466-201ENSMUST00000212174 422 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.42□□□□□ -0.1
Smc3Q9CW03 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smc3Q9CW03 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.41□□□□□ -0.1
Smc3Q9CW03 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Gm6222-202ENSMUST00000182143 629 ntBASIC14.41□□□□□ -0.1
Smc3Q9CW03 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.41□□□□□ -0.1
Smc3Q9CW03 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.41□□□□□ -0.1
Smc3Q9CW03 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.41□□□□□ -0.1
Smc3Q9CW03 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.41□□□□□ -0.1
Smc3Q9CW03 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc3Q9CW03 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Gm12390-201ENSMUST00000117897 397 ntBASIC14.4□□□□□ -0.1
Smc3Q9CW03 Gm13736-201ENSMUST00000119272 253 ntBASIC14.4□□□□□ -0.1
Smc3Q9CW03 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 Gm7809-201ENSMUST00000153199 742 ntBASIC14.4□□□□□ -0.1
Smc3Q9CW03 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc3Q9CW03 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.4□□□□□ -0.1
Smc3Q9CW03 Gm44958-201ENSMUST00000203734 736 ntBASIC14.4□□□□□ -0.1
Smc3Q9CW03 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms