Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm7Q9CQQ8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Gm4909-201ENSMUST00000118749 794 ntBASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Mir7070-201ENSMUST00000183657 86 ntBASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm7Q9CQQ8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm7Q9CQQ8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm12217-201ENSMUST00000118858 696 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Mir5132-201ENSMUST00000175166 71 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm28071-201ENSMUST00000190355 478 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm43962-201ENSMUST00000203898 190 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm7Q9CQQ8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms