Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm11637-201ENSMUST00000120601 592 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Krt88Q9CPR6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm7488-201ENSMUST00000117148 684 ntBASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm13123-201ENSMUST00000122173 492 ntBASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm37042-201ENSMUST00000193816 581 ntBASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.06□□□□□ -0.64
Krt88Q9CPR6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms