Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm14234-201ENSMUST00000119539 845 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm15196-201ENSMUST00000121406 482 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm25554-201ENSMUST00000158075 113 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh23Q99PF4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Mir432-201ENSMUST00000157230 75 ntBASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Gm8574-201ENSMUST00000203207 924 ntBASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdh23Q99PF4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm14497-201ENSMUST00000119537 580 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm3150-201ENSMUST00000166418 204 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.14□□□□□ -0.47
Cdh23Q99PF4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Mir744-201ENSMUST00000103261 100 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm14760-201ENSMUST00000121831 999 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Mir6953-201ENSMUST00000184745 68 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm12684-201ENSMUST00000118675 999 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms