Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Raf1Q99N57 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.08□□□□□ -0.64
Raf1Q99N57 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.08□□□□□ -0.64
Raf1Q99N57 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Raf1Q99N57 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Raf1Q99N57 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.08□□□□□ -0.64
Raf1Q99N57 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raf1Q99N57 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.08□□□□□ -0.64
Raf1Q99N57 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm8810-201ENSMUST00000172895 754 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Mir3102-201ENSMUST00000175555 104 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm18827-201ENSMUST00000188341 790 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm42599-201ENSMUST00000201308 469 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm29705-201ENSMUST00000212598 474 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Gm9823-201ENSMUST00000051212 327 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.07□□□□□ -0.64
Raf1Q99N57 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.07□□□□□ -0.64
Raf1Q99N57 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raf1Q99N57 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Raf1Q99N57 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Raf1Q99N57 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.06□□□□□ -0.64
Raf1Q99N57 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Raf1Q99N57 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Raf1Q99N57 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.06□□□□□ -0.64
Raf1Q99N57 Gm14760-201ENSMUST00000121831 999 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms