Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-1Q99MA9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Gm11956-201ENSMUST00000119525 512 ntBASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Gm8199-201ENSMUST00000121323 823 ntBASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-1Q99MA9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm15703-201ENSMUST00000120250 880 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm14585-201ENSMUST00000120713 634 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm9022-201ENSMUST00000182482 992 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Mir6998-201ENSMUST00000183343 64 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm3793-201ENSMUST00000204973 672 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm17831-201ENSMUST00000205579 900 ntBASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-1Q99MA9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms