Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.81□□□□□ -0.68
Scrt1Q99M85 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.81□□□□□ -0.68
Scrt1Q99M85 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Scrt1Q99M85 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm15432-201ENSMUST00000121106 195 ntBASIC10.8□□□□□ -0.68
Scrt1Q99M85 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm19353-201ENSMUST00000184561 445 ntBASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.8□□□□□ -0.68
Scrt1Q99M85 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.8□□□□□ -0.68
Scrt1Q99M85 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Scrt1Q99M85 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.8□□□□□ -0.68
Scrt1Q99M85 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm12380-201ENSMUST00000119012 544 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm10051-201ENSMUST00000145209 414 ntBASIC10.79□□□□□ -0.68
Scrt1Q99M85 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.79□□□□□ -0.68
Scrt1Q99M85 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Scrt1Q99M85 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms