Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gm43630-201ENSMUST00000201550 776 ntBASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp1b1Q99LU0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm7809-201ENSMUST00000153199 742 ntBASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm37008-201ENSMUST00000195712 319 ntBASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm45880-201ENSMUST00000213041 853 ntBASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp1b1Q99LU0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm11591-201ENSMUST00000120063 702 ntBASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Rmrp-201ENSMUST00000157463 271 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms