Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.96□□□□□ -0.33
Usp11Q99K46 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.96□□□□□ -0.33
Usp11Q99K46 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm42693-201ENSMUST00000196779 631 ntBASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm43133-201ENSMUST00000197472 463 ntBASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.96□□□□□ -0.33
Usp11Q99K46 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.96□□□□□ -0.33
Usp11Q99K46 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Usp11Q99K46 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp11Q99K46 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Usp11Q99K46 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Usp11Q99K46 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.96□□□□□ -0.34
Usp11Q99K46 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Usp11Q99K46 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Usp11Q99K46 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm38092-201ENSMUST00000195600 653 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm5781-201ENSMUST00000219792 443 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Daam2-202ENSMUST00000224595 1926 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.95□□□□□ -0.34
Usp11Q99K46 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Usp11Q99K46 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Usp11Q99K46 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp11Q99K46 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Usp11Q99K46 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm12502-201ENSMUST00000120197 444 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm24548-201ENSMUST00000158650 108 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm8738-201ENSMUST00000172606 329 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms