Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd2Q99JR8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd2Q99JR8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcd2Q99JR8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.4□□□□□ -0.43
Smarcd2Q99JR8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcd2Q99JR8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Smarcd2Q99JR8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm12164-201ENSMUST00000121695 551 ntBASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm8365-201ENSMUST00000197334 648 ntBASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd2Q99JR8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm9540-201ENSMUST00000188230 478 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm17831-201ENSMUST00000205579 900 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.38□□□□□ -0.43
Smarcd2Q99JR8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Smarcd2Q99JR8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms