Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm24934-201ENSMUST00000103764 111 ntBASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm12849-201ENSMUST00000120013 739 ntBASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm38317-201ENSMUST00000195564 343 ntBASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm42937-201ENSMUST00000197360 752 ntBASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb2Q91Y00 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm14363-201ENSMUST00000122304 409 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm4857-201ENSMUST00000192718 785 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm44967-201ENSMUST00000207047 631 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Gm9519-201ENSMUST00000206108 1337 ntBASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb2Q91Y00 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm15808-201ENSMUST00000119046 604 ntBASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm13665-201ENSMUST00000120830 528 ntBASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb2Q91Y00 AC159246.1-201ENSMUST00000214478 249 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms