Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm42603-201ENSMUST00000199893 2146 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm13392-201ENSMUST00000117708 150 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm16411-201ENSMUST00000122164 1100 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm26254-201ENSMUST00000122491 118 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 AC163664.1-201ENSMUST00000226251 1248 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Cxcl2-201ENSMUST00000075433 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm45793-201ENSMUST00000207900 1342 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Zfp983-201ENSMUST00000039726 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb20Q91XZ9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm14356-201ENSMUST00000118322 869 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8737-201ENSMUST00000122208 642 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm3025-201ENSMUST00000163454 489 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm3077-201ENSMUST00000165903 627 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Gm2878-201ENSMUST00000170173 486 ntBASIC12.49□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms