Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga11Q91XY8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Gm42693-201ENSMUST00000196779 631 ntBASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga11Q91XY8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm27572-201ENSMUST00000183702 255 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm5904-201ENSMUST00000210286 865 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm24136-201ENSMUST00000083374 165 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhga11Q91XY8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms