Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.04□□□□□ -0.16
Trex1Q91XB0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.03□□□□□ -0.16
Trex1Q91XB0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm8285-201ENSMUST00000208293 759 ntBASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.03□□□□□ -0.16
Trex1Q91XB0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trex1Q91XB0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.02□□□□□ -0.16
Trex1Q91XB0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.02□□□□□ -0.16
Trex1Q91XB0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trex1Q91XB0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Gm13809-201ENSMUST00000117921 597 ntBASIC14.02□□□□□ -0.17
Trex1Q91XB0 Gm5419-201ENSMUST00000119301 527 ntBASIC14.02□□□□□ -0.17
Trex1Q91XB0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Mir7686-201ENSMUST00000200604 57 ntBASIC14.02□□□□□ -0.17
Trex1Q91XB0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Gm5705-201ENSMUST00000066241 711 ntBASIC14.02□□□□□ -0.17
Trex1Q91XB0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trex1Q91XB0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trex1Q91XB0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.01□□□□□ -0.17
Trex1Q91XB0 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.01□□□□□ -0.17
Trex1Q91XB0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.01□□□□□ -0.17
Trex1Q91XB0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Gm11667-201ENSMUST00000119828 486 ntBASIC14.01□□□□□ -0.17
Trex1Q91XB0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trex1Q91XB0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms