Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh18Q8VHR0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Gm8463-201ENSMUST00000208573 613 ntBASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh18Q8VHR0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Gm23984-201ENSMUST00000157139 203 ntBASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh18Q8VHR0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms