Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rprd1aQ8VDS4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Gm15276-201ENSMUST00000145953 498 ntBASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rprd1aQ8VDS4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm24934-201ENSMUST00000103764 111 ntBASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Mir877-201ENSMUST00000104738 85 ntBASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm9630-201ENSMUST00000178304 885 ntBASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rprd1aQ8VDS4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms