Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc6a20aQ8VDB9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm2546-201ENSMUST00000182630 991 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm37424-201ENSMUST00000191727 561 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.11□□□□□ -0.47
Slc6a20aQ8VDB9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm45880-201ENSMUST00000213041 853 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm9899-201ENSMUST00000065519 555 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a20aQ8VDB9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms