Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Gm12314-201ENSMUST00000118104 538 ntBASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Gm11439-201ENSMUST00000118598 409 ntBASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Pck2-205ENSMUST00000226352 2784 ntBASIC11.62□□□□□ -0.55
Ndc1Q8VCB1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm45224-201ENSMUST00000208203 414 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.61□□□□□ -0.55
Ndc1Q8VCB1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ndc1Q8VCB1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms