Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.89□□□□□ -0.51
Rnf8Q8VC56 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gm19163-201ENSMUST00000223313 780 ntBASIC11.89□□□□□ -0.51
Rnf8Q8VC56 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Snora73a-201ENSMUST00000082453 205 ntBASIC11.89□□□□□ -0.51
Rnf8Q8VC56 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf8Q8VC56 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm12957-201ENSMUST00000117835 377 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm12363-201ENSMUST00000122250 668 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm17420-201ENSMUST00000164753 153 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm9630-201ENSMUST00000178304 885 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Gm9899-201ENSMUST00000065519 555 ntBASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf8Q8VC56 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Rnf8Q8VC56 Gm14921-201ENSMUST00000118643 908 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms