Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.78□□□□□ -0.04
Ccdc9Q8VC31 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ccdc9Q8VC31 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Mir497b-201ENSMUST00000093601 125 ntBASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Gm6560-201ENSMUST00000198588 1591 ntBASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc9Q8VC31 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm22175-201ENSMUST00000175007 78 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm27533-201ENSMUST00000183800 152 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc9Q8VC31 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Gm10576-201ENSMUST00000191927 825 ntBASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.75□□□□□ -0.05
Ccdc9Q8VC31 Gm37714-201ENSMUST00000194742 342 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms