Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gm44100-201ENSMUST00000204329 436 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Gm29787-201ENSMUST00000222129 849 ntBASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Zcchc9Q8R1J3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Mir1943-201ENSMUST00000158276 73 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm7003-201ENSMUST00000195089 312 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Zcchc9Q8R1J3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms