Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Gm14109-201ENSMUST00000118814 309 ntBASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Gm27320-201ENSMUST00000184892 109 ntBASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3a1Q8K4Z5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Gm27046-201ENSMUST00000182160 463 ntBASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Gm9996-201ENSMUST00000070359 913 ntBASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sf3a1Q8K4Z5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Matn2-203ENSMUST00000226766 3252 ntBASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Pck2-205ENSMUST00000226352 2784 ntBASIC15.02□□□□□ -0.01
Sf3a1Q8K4Z5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm24830-201ENSMUST00000102024 166 ntBASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm17376-201ENSMUST00000166016 84 ntBASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.01□□□□□ -0.01
Sf3a1Q8K4Z5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms