Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lrif1Q8CDD9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lrif1Q8CDD9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lrif1Q8CDD9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm12957-201ENSMUST00000117835 377 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm43630-201ENSMUST00000201550 776 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lrif1Q8CDD9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrif1Q8CDD9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms