Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1Q8CCS6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pabpn1Q8CCS6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pabpn1Q8CCS6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1Q8CCS6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Gm37131-201ENSMUST00000192502 1561 ntBASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pabpn1Q8CCS6 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Gm42970-201ENSMUST00000196407 1352 ntBASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1Q8CCS6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Gm11540-201ENSMUST00000117457 780 ntBASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Gm12389-201ENSMUST00000117696 418 ntBASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Gm1826-201ENSMUST00000118646 1162 ntBASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1Q8CCS6 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Gm37014-201ENSMUST00000194723 2253 ntBASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Gm14760-201ENSMUST00000121831 999 ntBASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Gm6216-201ENSMUST00000182390 687 ntBASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Gm27675-201ENSMUST00000184527 94 ntBASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 AC022682.1-201ENSMUST00000224624 2023 ntBASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.62■□□□□ 0.57
Pabpn1Q8CCS6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm6755-201ENSMUST00000100598 864 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm6740-201ENSMUST00000100617 864 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm22495-201ENSMUST00000104492 126 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm11736-201ENSMUST00000121468 505 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Zcwpw2-203ENSMUST00000187803 372 ntBASIC18.61■□□□□ 0.57
Pabpn1Q8CCS6 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms