Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm27516-201ENSMUST00000184237 98 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm43438-201ENSMUST00000198133 379 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm35960-201ENSMUST00000202712 767 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim9Q8C7M3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim9Q8C7M3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm2991-201ENSMUST00000173338 480 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm18711-201ENSMUST00000199341 750 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm6334-201ENSMUST00000207083 228 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Gm9368-201ENSMUST00000219348 831 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim9Q8C7M3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gm14247-201ENSMUST00000120950 237 ntBASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Gm21769-201ENSMUST00000211922 111 ntBASIC13.51□□□□□ -0.25
Trim9Q8C7M3 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.51□□□□□ -0.25
Trim9Q8C7M3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms