Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm11996-201ENSMUST00000117538 915 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm24844-201ENSMUST00000158679 127 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm29548-201ENSMUST00000187012 694 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm28105-201ENSMUST00000187788 694 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm33707-201ENSMUST00000195135 569 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm9204-201ENSMUST00000212641 947 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd9Q8BYH8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm23595-201ENSMUST00000104306 130 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm23769-201ENSMUST00000104441 121 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm23912-201ENSMUST00000104687 87 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm34379-201ENSMUST00000195036 290 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm11560-201ENSMUST00000117567 948 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm13094-201ENSMUST00000117930 409 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm17541-201ENSMUST00000080062 525 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.55□□□□□ -0.88
Chd9Q8BYH8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Mir8093-201ENSMUST00000185043 137 ntBASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Ighv5-1-201ENSMUST00000193324 353 ntBASIC9.54□□□□□ -0.88
Chd9Q8BYH8 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.54□□□□□ -0.88
Chd9Q8BYH8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms