Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Mir7677-201ENSMUST00000184226 67 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm3332-201ENSMUST00000189337 928 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm9555-201ENSMUST00000200908 583 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Gm26448-201ENSMUST00000082446 203 ntBASIC17.25■□□□□ 0.35
Usp47Q8BY87 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp47Q8BY87 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm8155-201ENSMUST00000216363 1612 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm13035-201ENSMUST00000117496 342 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm11450-201ENSMUST00000121144 333 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 AC121960.1-201ENSMUST00000227982 564 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gm5705-201ENSMUST00000066241 711 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 AC173482.6-201ENSMUST00000225889 1741 ntBASIC17.24■□□□□ 0.35
Usp47Q8BY87 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp47Q8BY87 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm37348-201ENSMUST00000193104 1789 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm15004-201ENSMUST00000119192 630 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm27390-201ENSMUST00000184516 176 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm42629-201ENSMUST00000199063 1102 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm807-202ENSMUST00000224929 408 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Gm36970-201ENSMUST00000193688 1859 ntBASIC17.23■□□□□ 0.35
Usp47Q8BY87 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp47Q8BY87 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms