Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm22442-201ENSMUST00000157256 144 ntBASIC17.15■□□□□ 0.34
Usp54Q8BL06 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Usp54Q8BL06 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Usp54Q8BL06 Gm7278-201ENSMUST00000119836 1401 ntBASIC17.14■□□□□ 0.34
Usp54Q8BL06 Gm15784-201ENSMUST00000120260 1462 ntBASIC17.14■□□□□ 0.34
Usp54Q8BL06 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Gm36970-201ENSMUST00000193688 1859 ntBASIC17.14■□□□□ 0.33
Usp54Q8BL06 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.14■□□□□ 0.33
Usp54Q8BL06 Gm14441-201ENSMUST00000121960 540 ntBASIC17.14■□□□□ 0.33
Usp54Q8BL06 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Gm22877-201ENSMUST00000175451 105 ntBASIC17.14■□□□□ 0.33
Usp54Q8BL06 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp54Q8BL06 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.14■□□□□ 0.33
Usp54Q8BL06 Gm3726-201ENSMUST00000203110 785 ntBASIC17.14■□□□□ 0.33
Usp54Q8BL06 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp54Q8BL06 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Gm18642-201ENSMUST00000206642 1400 ntBASIC17.13■□□□□ 0.33
Usp54Q8BL06 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Gm6114-201ENSMUST00000182472 968 ntBASIC17.13■□□□□ 0.33
Usp54Q8BL06 Gm45592-201ENSMUST00000209605 1043 ntBASIC17.13■□□□□ 0.33
Usp54Q8BL06 AC164618.2-201ENSMUST00000224770 573 ntBASIC17.13■□□□□ 0.33
Usp54Q8BL06 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Usp54Q8BL06 AC164702.1-201ENSMUST00000220135 2212 ntBASIC17.13■□□□□ 0.33
Usp54Q8BL06 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp54Q8BL06 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Gm13047-201ENSMUST00000117116 815 ntBASIC17.12■□□□□ 0.33
Usp54Q8BL06 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC17.12■□□□□ 0.33
Usp54Q8BL06 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.12■□□□□ 0.33
Usp54Q8BL06 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp54Q8BL06 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm11354-201ENSMUST00000121974 422 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm18706-201ENSMUST00000210053 1066 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 AC114645.1-201ENSMUST00000215831 187 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm6722-201ENSMUST00000221586 390 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 AC122346.3-201ENSMUST00000223983 306 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms