Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nop53Q8BK35 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nop53Q8BK35 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nop53Q8BK35 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nop53Q8BK35 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.21□□□□□ -0.3
Nop53Q8BK35 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Nop53Q8BK35 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nop53Q8BK35 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nop53Q8BK35 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nop53Q8BK35 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop53Q8BK35 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm17420-201ENSMUST00000164753 153 ntBASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm42693-201ENSMUST00000196779 631 ntBASIC13.19□□□□□ -0.3
Nop53Q8BK35 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm6007-201ENSMUST00000208170 823 ntBASIC13.19□□□□□ -0.3
Nop53Q8BK35 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.19□□□□□ -0.3
Nop53Q8BK35 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop53Q8BK35 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.18□□□□□ -0.3
Nop53Q8BK35 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Nop53Q8BK35 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop53Q8BK35 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop53Q8BK35 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nop53Q8BK35 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop53Q8BK35 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Nop53Q8BK35 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop53Q8BK35 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nop53Q8BK35 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop53Q8BK35 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.18□□□□□ -0.3
Nop53Q8BK35 Gm5187-201ENSMUST00000117317 991 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms