Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf38Q8BI21 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm13315-201ENSMUST00000120376 991 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm16177-201ENSMUST00000120728 718 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm29127-201ENSMUST00000188304 517 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm35960-201ENSMUST00000202712 767 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm24136-201ENSMUST00000083374 165 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf38Q8BI21 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Gm15824-201ENSMUST00000119516 955 ntBASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Gm43433-201ENSMUST00000196573 481 ntBASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Gm6266-201ENSMUST00000203844 806 ntBASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.87□□□□□ -0.51
Rnf38Q8BI21 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf38Q8BI21 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms