Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.36□□□□□ -0.27
Depdc1bQ8BH88 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm13316-201ENSMUST00000140537 691 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm8018-201ENSMUST00000173536 789 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm29199-201ENSMUST00000187766 775 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Daam2-202ENSMUST00000224595 1926 ntBASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Depdc1bQ8BH88 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm11597-201ENSMUST00000121423 964 ntBASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm17376-201ENSMUST00000166016 84 ntBASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm9022-201ENSMUST00000182482 992 ntBASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm6082-201ENSMUST00000215204 454 ntBASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Depdc1bQ8BH88 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms