Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atg4dQ8BGV9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm7722-201ENSMUST00000120646 741 ntBASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm26361-201ENSMUST00000158868 186 ntBASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm45224-201ENSMUST00000208203 414 ntBASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atg4dQ8BGV9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Mir877-201ENSMUST00000104738 85 ntBASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Gm9257-201ENSMUST00000221254 232 ntBASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms