Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Samm50Q8BGH2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Mir6420-201ENSMUST00000185032 102 ntBASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Olfr284-202ENSMUST00000206647 966 ntBASIC14.4□□□□□ -0.1
Samm50Q8BGH2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Samm50Q8BGH2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Mir1247-201ENSMUST00000116706 82 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm37489-201ENSMUST00000191883 159 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Samm50Q8BGH2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Cog3-203ENSMUST00000227473 4197 ntBASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Gm12241-201ENSMUST00000118330 726 ntBASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Samm50Q8BGH2 Gm24548-201ENSMUST00000158650 108 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms