Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh19Q80TF3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm37319-201ENSMUST00000193500 636 ntBASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm42660-201ENSMUST00000197733 947 ntBASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh19Q80TF3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh19Q80TF3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh19Q80TF3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm28450-201ENSMUST00000187349 638 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm18753-201ENSMUST00000201000 566 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh19Q80TF3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms