Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.99□□□□□ -0.81
Vma21Q78T54 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gm27839-201ENSMUST00000184242 106 ntBASIC9.99□□□□□ -0.81
Vma21Q78T54 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.99□□□□□ -0.81
Vma21Q78T54 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.99□□□□□ -0.81
Vma21Q78T54 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.99□□□□□ -0.81
Vma21Q78T54 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Vma21Q78T54 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm9022-201ENSMUST00000182482 992 ntBASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm27243-201ENSMUST00000183964 521 ntBASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm4034-201ENSMUST00000187674 480 ntBASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm35960-201ENSMUST00000202712 767 ntBASIC9.98□□□□□ -0.81
Vma21Q78T54 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Vma21Q78T54 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.98□□□□□ -0.81
Vma21Q78T54 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.97□□□□□ -0.81
Vma21Q78T54 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.97□□□□□ -0.81
Vma21Q78T54 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.97□□□□□ -0.81
Vma21Q78T54 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Vma21Q78T54 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.97□□□□□ -0.81
Vma21Q78T54 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vma21Q78T54 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms