Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smarcd3Q6P9Z1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm13492-201ENSMUST00000119772 665 ntBASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm27847-201ENSMUST00000183711 107 ntBASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm27375-201ENSMUST00000183799 107 ntBASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm42599-201ENSMUST00000201308 469 ntBASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm5186-201ENSMUST00000218781 920 ntBASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smarcd3Q6P9Z1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smarcd3Q6P9Z1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gm11964-201ENSMUST00000120982 444 ntBASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gm7029-201ENSMUST00000173226 450 ntBASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gm24136-201ENSMUST00000083374 165 ntBASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms