Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.32□□□□□ -0.6
AtmQ62388 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
AtmQ62388 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
AtmQ62388 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.32□□□□□ -0.6
AtmQ62388 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.32□□□□□ -0.6
AtmQ62388 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.32□□□□□ -0.6
AtmQ62388 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
AtmQ62388 Gm11957-201ENSMUST00000118304 779 ntBASIC11.32□□□□□ -0.6
AtmQ62388 Gm17192-201ENSMUST00000169031 511 ntBASIC11.32□□□□□ -0.6
AtmQ62388 Gm27956-201ENSMUST00000175604 260 ntBASIC11.32□□□□□ -0.6
AtmQ62388 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.32□□□□□ -0.6
AtmQ62388 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.31□□□□□ -0.6
AtmQ62388 Gm37782-201ENSMUST00000194879 678 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.31□□□□□ -0.6
AtmQ62388 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.31□□□□□ -0.6
AtmQ62388 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
AtmQ62388 Gm13351-201ENSMUST00000118087 414 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm11783-201ENSMUST00000119549 885 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm24943-201ENSMUST00000158329 433 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Gm23400-201ENSMUST00000174994 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm26463-201ENSMUST00000175065 101 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm24332-201ENSMUST00000175102 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25959-201ENSMUST00000175112 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm22475-201ENSMUST00000175169 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm22903-201ENSMUST00000175193 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25070-201ENSMUST00000175237 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm24159-201ENSMUST00000175264 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25299-201ENSMUST00000175283 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm23798-201ENSMUST00000175560 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm23802-201ENSMUST00000175565 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25708-201ENSMUST00000177687 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm24370-201ENSMUST00000178007 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm23049-201ENSMUST00000178068 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm28019-201ENSMUST00000178138 101 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25571-201ENSMUST00000178322 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25355-201ENSMUST00000178456 101 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm24975-201ENSMUST00000178492 101 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm23189-201ENSMUST00000178954 102 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm25100-201ENSMUST00000179750 101 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm23064-201ENSMUST00000179866 101 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.31□□□□□ -0.6
AtmQ62388 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.31□□□□□ -0.6
AtmQ62388 Gm44506-201ENSMUST00000206278 965 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Gm45113-201ENSMUST00000207518 165 ntBASIC11.31□□□□□ -0.6
AtmQ62388 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.31□□□□□ -0.6
AtmQ62388 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtmQ62388 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Gm14247-201ENSMUST00000120950 237 ntBASIC11.3□□□□□ -0.6
AtmQ62388 Gm13981-201ENSMUST00000122360 447 ntBASIC11.3□□□□□ -0.6
AtmQ62388 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
AtmQ62388 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.3□□□□□ -0.6
AtmQ62388 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.3□□□□□ -0.6
AtmQ62388 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Gm6564-201ENSMUST00000075377 619 ntBASIC11.3□□□□□ -0.6
AtmQ62388 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
AtmQ62388 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AtmQ62388 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms