Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn9aQ62205 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm24791-201ENSMUST00000104284 131 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm45113-201ENSMUST00000207518 165 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm30671-201ENSMUST00000214898 318 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm6390-201ENSMUST00000215034 589 ntBASIC14.18□□□□□ -0.14
Scn9aQ62205 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn9aQ62205 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn9aQ62205 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn9aQ62205 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn9aQ62205 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.17□□□□□ -0.14
Scn9aQ62205 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm14213-201ENSMUST00000119778 768 ntBASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm18776-201ENSMUST00000188833 654 ntBASIC14.17□□□□□ -0.14
Scn9aQ62205 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn9aQ62205 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn9aQ62205 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn9aQ62205 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.17□□□□□ -0.14
Scn9aQ62205 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm11244-201ENSMUST00000121243 237 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm5340-201ENSMUST00000203733 880 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn9aQ62205 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.16□□□□□ -0.14
Scn9aQ62205 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn9aQ62205 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.16□□□□□ -0.14
Scn9aQ62205 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms