Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm11439-201ENSMUST00000118598 409 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm16505-201ENSMUST00000179981 232 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm27341-201ENSMUST00000183570 106 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm9230-201ENSMUST00000188228 532 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.51□□□□□ -0.09
Ctr9Q62018 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.51□□□□□ -0.09
Ctr9Q62018 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ctr9Q62018 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ctr9Q62018 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.5□□□□□ -0.09
Ctr9Q62018 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Gm5363-201ENSMUST00000211927 938 ntBASIC14.5□□□□□ -0.09
Ctr9Q62018 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.5□□□□□ -0.09
Ctr9Q62018 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.5□□□□□ -0.09
Ctr9Q62018 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ctr9Q62018 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ctr9Q62018 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ctr9Q62018 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Gm14028-201ENSMUST00000117434 479 ntBASIC14.49□□□□□ -0.09
Ctr9Q62018 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.49□□□□□ -0.09
Ctr9Q62018 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.49□□□□□ -0.09
Ctr9Q62018 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.49□□□□□ -0.09
Ctr9Q62018 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ctr9Q62018 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.49□□□□□ -0.09
Ctr9Q62018 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctr9Q62018 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms