Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox17Q61473 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sox17Q61473 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox17Q61473 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox17Q61473 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox17Q61473 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm18624-201ENSMUST00000220966 658 ntBASIC11.48□□□□□ -0.57
Sox17Q61473 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.48□□□□□ -0.57
Sox17Q61473 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox17Q61473 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sox17Q61473 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox17Q61473 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox17Q61473 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Sox17Q61473 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox17Q61473 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.47□□□□□ -0.57
Sox17Q61473 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox17Q61473 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox17Q61473 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox17Q61473 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm13369-201ENSMUST00000119442 987 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm26185-201ENSMUST00000157692 266 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox17Q61473 Mir6392-201ENSMUST00000184924 108 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Sox17Q61473 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm37917-201ENSMUST00000194711 392 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Sox17Q61473 Gm20949-201ENSMUST00000206478 952 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox17Q61473 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.47□□□□□ -0.57
Sox17Q61473 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms