Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.57□□□□□ -0.24
Ift88Q61371 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ift88Q61371 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm16177-201ENSMUST00000120728 718 ntBASIC13.57□□□□□ -0.24
Ift88Q61371 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.57□□□□□ -0.24
Ift88Q61371 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm18584-201ENSMUST00000203098 964 ntBASIC13.57□□□□□ -0.24
Ift88Q61371 Gm44958-201ENSMUST00000203734 736 ntBASIC13.57□□□□□ -0.24
Ift88Q61371 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ift88Q61371 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ift88Q61371 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ift88Q61371 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ift88Q61371 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ift88Q61371 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Ift88Q61371 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ift88Q61371 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.56□□□□□ -0.24
Ift88Q61371 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.56□□□□□ -0.24
Ift88Q61371 Gm1335-201ENSMUST00000121653 386 ntBASIC13.56□□□□□ -0.24
Ift88Q61371 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.56□□□□□ -0.24
Ift88Q61371 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.56□□□□□ -0.24
Ift88Q61371 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.56□□□□□ -0.24
Ift88Q61371 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.56□□□□□ -0.24
Ift88Q61371 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.56□□□□□ -0.24
Ift88Q61371 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.56□□□□□ -0.24
Ift88Q61371 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Ift88Q61371 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.56□□□□□ -0.24
Ift88Q61371 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ift88Q61371 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ift88Q61371 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ift88Q61371 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ift88Q61371 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ift88Q61371 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Ift88Q61371 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.55□□□□□ -0.24
Ift88Q61371 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.55□□□□□ -0.24
Ift88Q61371 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ift88Q61371 Gm12490-201ENSMUST00000120255 560 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Ift88Q61371 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms