Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Mir6941-201ENSMUST00000184711 59 ntBASIC13.46□□□□□ -0.25
Col11a1Q61245 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col11a1Q61245 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col11a1Q61245 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.46□□□□□ -0.26
Col11a1Q61245 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm22846-201ENSMUST00000157706 270 ntBASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm24809-201ENSMUST00000175318 271 ntBASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm26976-201ENSMUST00000182929 908 ntBASIC13.46□□□□□ -0.26
Col11a1Q61245 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.46□□□□□ -0.26
Col11a1Q61245 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col11a1Q61245 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col11a1Q61245 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col11a1Q61245 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm15620-201ENSMUST00000122949 270 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm21778-201ENSMUST00000178779 471 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm5996-201ENSMUST00000211110 718 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.45□□□□□ -0.26
Col11a1Q61245 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col11a1Q61245 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col11a1Q61245 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col11a1Q61245 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms