Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.58□□□□□ -0.4
Slc6a4Q60857 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.58□□□□□ -0.4
Slc6a4Q60857 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.58□□□□□ -0.4
Slc6a4Q60857 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a4Q60857 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.57□□□□□ -0.4
Slc6a4Q60857 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm23949-201ENSMUST00000104027 127 ntBASIC12.57□□□□□ -0.4
Slc6a4Q60857 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.57□□□□□ -0.4
Slc6a4Q60857 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm5455-201ENSMUST00000058710 715 ntBASIC12.57□□□□□ -0.4
Slc6a4Q60857 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a4Q60857 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a4Q60857 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.56□□□□□ -0.4
Slc6a4Q60857 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.56□□□□□ -0.4
Slc6a4Q60857 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 B9d1os-201ENSMUST00000137010 674 ntBASIC12.56□□□□□ -0.4
Slc6a4Q60857 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.56□□□□□ -0.4
Slc6a4Q60857 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.56□□□□□ -0.4
Slc6a4Q60857 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Slc6a4Q60857 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms