Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.72□□□□□ -0.05
NfkbibQ60778 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.72□□□□□ -0.05
NfkbibQ60778 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NfkbibQ60778 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NfkbibQ60778 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
NfkbibQ60778 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.71□□□□□ -0.05
NfkbibQ60778 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.71□□□□□ -0.05
NfkbibQ60778 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.71□□□□□ -0.05
NfkbibQ60778 Mir5120-201ENSMUST00000175020 78 ntBASIC14.71□□□□□ -0.05
NfkbibQ60778 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.71□□□□□ -0.05
NfkbibQ60778 Gm26461-201ENSMUST00000175064 290 ntBASIC14.71□□□□□ -0.05
NfkbibQ60778 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
NfkbibQ60778 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NfkbibQ60778 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NfkbibQ60778 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NfkbibQ60778 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NfkbibQ60778 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.71□□□□□ -0.05
NfkbibQ60778 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NfkbibQ60778 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NfkbibQ60778 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NfkbibQ60778 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NfkbibQ60778 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NfkbibQ60778 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NfkbibQ60778 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NfkbibQ60778 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NfkbibQ60778 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NfkbibQ60778 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.7□□□□□ -0.06
NfkbibQ60778 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm18827-201ENSMUST00000188341 790 ntBASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm8956-201ENSMUST00000203939 825 ntBASIC14.7□□□□□ -0.06
NfkbibQ60778 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gm19208-201ENSMUST00000213861 912 ntBASIC14.7□□□□□ -0.06
NfkbibQ60778 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NfkbibQ60778 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
NfkbibQ60778 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NfkbibQ60778 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NfkbibQ60778 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NfkbibQ60778 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NfkbibQ60778 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NfkbibQ60778 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NfkbibQ60778 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.69□□□□□ -0.06
NfkbibQ60778 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NfkbibQ60778 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NfkbibQ60778 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NfkbibQ60778 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms